BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002D08SP1|AL424959
(986 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig971 1896 0.0
>3x_Contig971
Length = 3245
Score = 1896 bits (956), Expect = 0.0
Identities = 971/974 (99%), Gaps = 2/974 (0%)
Strand = Plus / Plus
Query: 1 ccaccagtggagaaattaagattatcgactttggattatctaacctttacgataacaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ccaccagtggagaaattaagattatcgactttggattatctaacctttacgataacaaga 568
Query: 61 aacagttacatacattttgcgggtcactctatttcgcagcaccagaactactaaaggcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aacagttacatacattttgcgggtcactctatttcgcagcaccagaactactaaaggcaa 628
Query: 121 acccttacattggacccgaggttgatatttggtccttcggtgtggtgatatacgtattgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 acccttacattggacccgaggttgatatttggtccttcggtgtggtgatatacgtattgg 688
Query: 181 tatgtggtaaagttccattcgatgacgaaaacgctagtgtntttacacgagaagattaag 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 689 tatgtggtaaagttccattcgatgacgaaaacgctagtgt-tttacacgagaagattaag 747
Query: 241 aagggcaaagttgaatatccacaacatctttccattgaatgtatatcgttactttcaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aagggcaaagttgaatatccacaacatctttccattgaatgtatatcgttactttcaaag 807
Query: 301 atgttggttgtagatccattgaaaagagcttctttgaaacaagtttgtaaccatcaatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 atgttggttgtagatccattgaaaagagcttctttgaaacaagtttgtaaccatcaatgg 867
Query: 361 atgcaaagagggtttgatttcccacccccttcgtatattccacatagagttcctttaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 atgcaaagagggtttgatttcccacccccttcgtatattccacatagagttcctttaaca 927
Query: 421 gttgaaatgcttgatgttaacgtaatcaaagaaatgcatcgtctagagttggttaatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 gttgaaatgcttgatgttaacgtaatcaaagaaatgcatcgtctagagttggttaatgat 987
Query: 481 gttaacgatgctttacaggctctgcgtgacattattgactcacatgaatataaagaactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 gttaacgatgctttacaggctctgcgtgacattattgactcacatgaatataaagaactg 1047
Query: 541 tcaagagaatattggtataacgtccaaaattccaataaccaggaagatggaaccagagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 tcaagagaatattggtataacgtccaaaattccaataaccaggaagatggaaccagagca 1107
Query: 601 ttccatcctttgctttctatttattatctagtcgacgaaatgctaaagaggaagctggcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 ttccatcctttgctttctatttattatctagtcgacgaaatgctaaagaggaagctggcc 1167
Query: 661 aaaagactacagaaacaacaacagctacaacaacagcaacagcaacaattacaggctggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 aaaagactacagaaacaacaacagctacaacaacagcaacagcaacaattacaggctggt 1227
Query: 721 tatcaatccaaaccatttcaaggtcaatcgcagcccatatttccatctgaccaagtggac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 tatcaatccaaaccatttcaaggtcaatcgcagcccatatttccatctgaccaagtggac 1287
Query: 781 acttcaataccattacctgatcaatcgcagccaaaaactctacaacaacctgtgtctgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1288 acttcaataccattacctgatcaatcgcagccaaaaactctacaacaacctgtgtctgtt 1347
Query: 841 aacaatagtgattatattgttcgaccatcaagtatcaaggaagtatctccagaacatacc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 aacaatagtgattatattgttcgaccatcaagtatcaaggaagtatctccagaacatacc 1407
Query: 901 acttctccggcagcgtacattccatccaatttagaaagaaattcgacagtwgttgcctca 960
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1408 acttctccggcagcgtacattccatccaatttagaaagaaattcgacagtagttgcctca 1467
Query: 961 -cagttaggaacaa 973
|||||||||||||
Sbjct: 1468 ccagttaggaacaa 1481
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8388
Number of Sequences: 1807
Number of extensions: 8388
Number of successful extensions: 221
Number of sequences better than 1.0e-20: 1
length of query: 986
length of database: 10,358,551
effective HSP length: 16
effective length of query: 970
effective length of database: 10,329,639
effective search space: 10019749830
effective search space used: 10019749830
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)